Professional Preparation

• Warsaw University, Poland, 1969-1974, M.Sc. Chemistry
• Institute of Physical-Chemistry of the Polish Academy of Science, Warsaw, Poland 1975-1980 Ph.D. Physical Chemistry
• Warsaw University, Poland, Habilitation (D.Sc.) 2001.

Appointments

2002-present

Scientist I, Iowa State University

1998-2002

Research Fellow, NIH

1997-1998

Senior Staff Fellow, NIH

1995-1997

Senior National Research Council Fellow, NIH

1987-1995

Postdoctoral Scholar, University of Cincinnati

1983-1987

Staff Scientist, Institute of Physical Chemistry, Warsaw, Poland

1981-1983

Postdoctoral Research Associate, Stanford University

Selected Publications (10 from 80 total)

Relevant Publications

• Kloczkowski, A., Ting, K-L., Jernigan, R.L. and Garnier, J.: Combining the GOR V Algorithm with Evolutionary Information for Protein Secondary Structure Prediction from Amino Acid Sequence, Proteins: Struct. Funct. Gen., 49, 154-166, 2002.
• Kloczkowski, A., Ting, K-L., Jernigan, R.L. and Garnier, J.: Protein Secondary Structure Prediction Based on the GOR Algorithm with Multiple Sequence Alignments, Polymer, 43, 441-449, 2002.
• Bagci, Z., Kloczkowski, A., Jernigan, R.L. and Bahar, I.: The Origin and Extent of Coarse Grained Irregularities in Protein Internal Packing, Proteins Struct. Funct. Dyn. 53: 56-67, 2003.
• Kloczkowski, A. and Jernigan, R.L.: Transfer Matrix Method for Enumeration and Generation of Compact Self-avoiding Walks. I. Square Lattice. J. Chem. Phys. 109: 5134-5146, 1998.
• Kloczkowski, A. and Jernigan, R.L.: Transfer Matrix Method for Enumeration and Generation of Compact Self-avoiding Walks. II. Cubic Lattice. J. Chem. Phys. 109: 5147-5159, 1998.

 

Significant Publications

• Kloczkowski, A. and Jernigan, R.L.: Efficient Method to Count and Generate Compact Protein Lattice Conformations, Macromolecules 30: 691-6694, 1997.
• Kloczkowski, A. and Jernigan, R.L.: Computer Generation and Enumeration of Compact Self-avoiding Walks within Simple Geometries on Lattices. Comput. Theoret. Polym. Sci. 7: 163-173, 1997.
• Kloczkowski, A.: Application of Statistical Mechanics to the Analysis of Various Physical Properties of Elastomeric Networks - A Review, Polymer, 43, 1503-1521, 2002.
• Kloczkowski, A, Erman B. and Mark, J.E.: Effect of Non- Gaussian Chains on Fluctuations of Junctions in Bimodal Networks, Polymer, 43, 2569-2574, 2002.
• Kloczkowski, A, Mark, J.E. and Frisch, H.L.: Relaxation Spectrum for Gaussian Networks, Macromolecules., 23, 3481-3490, 1990.

Synergetic Activities

Research

Statistical mechanics of protein folding. Prediction of protein secondary structure. Statistical mechanics of elastomeric networks. Protein dynamics. Prediction of protein binding sites.

Reviews

Reviews for Macromolecules, Polymer, Computational and Theoretical Polymer Science, Journal of Applied Polymer Science and several other journals. Grant reviewer for NSF.

Collaborators & Other Affiliations

Collaborators

Prof. R.L. Jernigan (Iowa State University, previously NCI, NIH), Prof. J.E. Mark (University of Cincinnati), Prof. B. Erman (Koc University, Turkey), Prof. J. Ross (Stanford University), Prof. H.L. Frisch (State University of New York at Albany)

Graduate students

N/A

© Copyright 2007. All rights reserved.